Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791187.1_cds_XP_016505898.1_1841
CDS Infomation

[gene=LOC107823719] [db_xref=GeneID:107823719] [protein=protein PHYTOCHROME KINASE SUBSTRATE 3-like] [protein_id=XP_016505898.1] [location=10183..11556] [gbkey=CDS]
Sequence

ATGGAAACCAATGATAATTCAACCAGCCTTCGTGTAGAATCATTTTCTTGTTACCTCAGC
AACCCTGAAGATCAGAGCTTTATACACAAACTAGGGGGCGCTTATGAAGATCCTTATCCC
GAGACCGCCTTTTCTGTGAGTTCAGAAAGAGCTACTATTAAACCACCCTCAAATAACAGT
ACTCGAGATAACCTTGCCAATCTTCGCGTTGATTCTTTTTCTTCTTATCTCAAAGCTGAA
GAAGATAATAACTTTGCGTTTAAGACCATAGGCCCCCCTGTTCAAGATGCTACTATTGCA
TTTGTTTTTCCTCAACAGGCTTCTGTGACTGTGGGTACTCCAAAATACCAAGAAAGGACC
AAGTCCAAAGATGGGGAACTTAACATATTCGGAGCTGATAAGTACTTCAACATGAAACTG
GATTATGGAGCTGTCCCTACAACTGTGGTGAAGTATGGGGGGCAGATGAACAAAGGGATG
GTTGATCTGCCCTACCTGAAACCCAGTTGCCGGACAGGAACTCAAAGTATTTGTTCTGAA
GCAAGTAGTTTTAATAGCCAAAGTGCACTGTTACAAAATCTTCAGACAAGTAAATCTCAA
ACAAAGCAGAAAAAGATGACAGGAAGGAGATTTTTATCTAGCTTCGGTTGCCAAGGACCT
TGTTTGGACAAAAAAGCAGTCTCTGTGGATGAAACCATAGGACATGGAAAAGTAAGTAAG
TTGGCATTAAGTTCTGGCCCTTCCATGAGAGACAAGTTGAGCATAGTCAAAAATCAAGAT
CCAAGCATCGAAGAGCAAAGAAAATCACTTGAAGTGTTTGGCTCTGATAAAATGCGAAAA
GGAGAGATAGCAGGGAATTTAGAAAGGAAACTCTCCATGTTAACTTGGGATGCCATTCCT
AAAGTTCAAGACATCCCTATTACAACCATTGGAAGCGGCACAGTTGGCGATGACATGGCT
AGCGATGCTAGTTCTGATTTATTCGAGATTGAGAATATATCCAGTAGTGGATATGGCCAC
ATGAATTCACAAACTAGGGGTGATAATTATGTGCCAACTGGCTGCATCTCACCAATTACA
ACTCAGTATGCACCAAGTGAGGCCAGTATTGAGTGGAGTGTTATCACATCAAGTGCTGCT
GATTACTCATCAGTTATCTCTGATTATGGTGAAAAGTGGATTAGCATTGCTGCTAATACT
ACTTCAAGGATTAATGCAGCCAATAAAAACACCAATACCAAGTATGCAGTTGGGAAAGAA
GGTCAAAAAACCCGTCCAGGTGGGCTTTTAGGTTGCAAGAGCAACAAAGCAGTTAGTGTG
GTTGAAACTGTATACAAAACTGGTGAGAAGGCTAAGCATCACCAGCGCGGTTAA

Peptide Sequence

PEP ID

XP_016505898.1
PEP Infomation

PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3-like [Nicotiana tabacum]
Sequence

METNDNSTSLRVESFSCYLSNPEDQSFIHKLGGAYEDPYPETAFSVSSERATIKPPSNNS
TRDNLANLRVDSFSSYLKAEEDNNFAFKTIGPPVQDATIAFVFPQQASVTVGTPKYQERT
KSKDGELNIFGADKYFNMKLDYGAVPTTVVKYGGQMNKGMVDLPYLKPSCRTGTQSICSE
ASSFNSQSALLQNLQTSKSQTKQKKMTGRRFLSSFGCQGPCLDKKAVSVDETIGHGKVSK
LALSSGPSMRDKLSIVKNQDPSIEEQRKSLEVFGSDKMRKGEIAGNLERKLSMLTWDAIP
KVQDIPITTIGSGTVGDDMASDASSDLFEIENISSSGYGHMNSQTRGDNYVPTGCISPIT
TQYAPSEASIEWSVITSSAADYSSVISDYGEKWISIAANTTSRINAANKNTNTKYAVGKE
GQKTRPGGLLGCKSNKAVSVVETVYKTGEKAKHHQRG

Transcript Sequence

Gene sequence data has not been registered.